MRIQC: individual T1w report

Summary

  • BIDS filename: sub-3048_ses-2_T1w.
  • Date and time: 2022-10-25, 17:21.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6890968057842938
cnr1.808954030078439
efc0.6031119445585924
fber1400.0725884887656
fwhmavg4.127703333333334
fwhmx4.01681
fwhmy4.68822
fwhmz3.67808
icvscsf0.19487261933578595
icvsgm0.41397136444446264
icvswm0.3911560162197514
inumed2.0403733253479004
inurange1.0192603349685663
qi10.0
qi20.0024520023001652637
rpvecsf28.485006103973923
rpvegm14.186537869410152
rpvewm17.87762572752664
sizex176
sizey256
sizez256
snrcsf3.1618980707757465
snrgm8.370938330383256
snrtotal9.956117072407958
snrwm18.335514816064872
snrdcsf24.57451829107776
snrdgm49.70347439940968
snrdtotal45.47084885716355
snrdwm62.13455388100322
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk11.607848447972298
summarybgmad10.54383277724756
summarybgmean18.55731370337814
summarybgmedian17.108352072536945
summarybgn2471848.0
summarybgp054.9647766798734665
summarybgp9538.2421987503767
summarybgstdv11.23158138855291
summarycsfk1.8591133933951225
summarycsfmad118.76732392484516
summarycsfmean417.5791331159938
summarycsfmedian395.50484497100115
summarycsfn19270.0
summarycsfp05252.22742823176088
summarycsfp95654.8875898636877
summarycsfstdv125.08138269926263
summarygmk0.3509508317602963
summarygmmad90.11992920930462
summarygmmean812.1373261312334
summarygmmedian799.9328696504235
summarygmn17598.0
summarygmp05677.6047977529466
summarygmp95993.2438297547396
summarygmstdv95.55800195968925
summarywmk1.166081595619092
summarywmmad47.745657859234235
summarywmmean1006.129107060578
summarywmmedian999.9999515339732
summarywmn212430.0
summarywmp05927.8094149455428
summarywmp951106.4742838442326
summarywmstdv54.538833943110205
tpmoverlapcsf0.15050432085990906
tpmoverlapgm0.4388713240623474
tpmoverlapwm0.49743905663490295
wm2max0.42104718998315616
AcquisitionMatrixPE256
AcquisitionNumber1
AcquisitionTime12:42:33.140000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.023409, 0.996402, 0.0814593, -0.0587995, 0.0799683, -0.995062]
ImageOrientationTextSag>Tra(3.3)>Cor(-1.6)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps191
PhaseResolution1
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0325741
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber8
ShimSetting[2610, 5436, -7493, -73, -8, -716, 243, -279]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp272.518
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum6532bcc7feee05fe8cda7c411046b27f
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.